Publications of Daniel Schindler
All genres
Journal Article (29)
2018
Journal Article
7 (1), 3 (2018)
Establishing a System for Testing Replication Inhibition of the Vibrio cholerae Secondary Chromosome in Escherichia coli. ANTIBIOTICS-BASEL 2016
Journal Article
4, 96 (2016)
Optimization and characterization of the synthetic secondary chromosome synVicII in Escherichia coli. FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY
Journal Article
5 (12), pp. 1362 - 1368 (2016)
Design and Assembly of DNA Sequence Libraries for Chromosomal Insertion in Bacteria Based on a Set of Modified MoClo Vectors. ACS SYNTHETIC BIOLOGY 2015
Journal Article
39 (6), pp. 871 - 891 (2015)
Synthetic chromosomes. FEMS MICROBIOLOGY REVIEWS
Journal Article
10 (2), pp. 302 - 314 (2015)
Synthetic secondary chromosomes in Escherichia coli based on the replication origin of chromosome II in Vibrio cholerae. SI 2014
Journal Article
68, pp. 48 - 59 (2014)
The polyketide synthase gene pks4 is essential for sexual development and regulates fruiting body morphology in Sordaria macrospora. FUNGAL GENETICS AND BIOLOGY 2013
Journal Article
14, 638 (2013)
"Non-canonical protein-DNA interactions identified by ChIP are not artifacts": response. BMC GENOMICS
Journal Article
53 (9), pp. 742 - 751 (2013)
Suppression subtractive hybridization and comparative expression analysis to identify developmentally regulated genes in filamentous fungi. JOURNAL OF BASIC MICROBIOLOGY 2012
Journal Article
84 (4), pp. 748 - 765 (2012)
The histone chaperone ASF1 is essential for sexual development in the filamentous fungus Sordaria macrospora. MOLECULAR MICROBIOLOGY Book Chapter (1)
2024
Book Chapter
2760 (Ed. Braman, J. C.). Humana, New York, NY. (2024)
In Silico Design, In Vitro Construction, and In Vivo Application of Synthetic Small Regulatory RNAs in Bacteria. In: Synthetic Biology. Methods in Molecular Biology, Vol. Conference Paper (1)
2018
Conference Paper
Modular Assembly of Synthetic Secondary Chromosomes. In: BACTERIAL CHROMATIN: Methods and Protocols, pp. 71 - 94. (2018)
Preprint (14)
2024
Preprint
A library-based approach allows systematic and rapid evaluation of seed region length and reveals design rules for synthetic bacterial small RNAs. (2024)
Preprint
T4 phage RNA is NAD-capped and alters the NAD-cap epitranscriptome of Escherichia coli during infection through a phage-encoded decapping enzyme. (2024)
Preprint
Use of a Golden Gate plasmid set enabling scarless MoClo-compatible transcription unit assembly. (2024)
Preprint
Temporal epigenome modulation enables efficient bacteriophage engineering and functional analysis of phage DNA modifications. (2024)
Preprint
Validation of Golden Gate assemblies using highly multiplexed Nanopore amplicon sequencing. (2024)
Preprint
Identification, structure and function of the methyltransferase involved in the biosynthesis of the dithiolopyrrolone antibiotic xenorhabdin. (2024)
2023
Preprint
Automation and miniaturization of Golden Gate DNA assembly reactions using acoustic dispensers. (2023)
Preprint
In silico design, in vitro construction and in vivo application of synthetic small regulatory RNAs in bacteria. (2023)
Preprint
A supernumerary synthetic chromosome in Komagataella phaffii as a repository for extraneous genetic material. (2023)