Publications of Jan Zarzycki

Journal Article (23)

Journal Article
Schulz, L.; Zarzycki, J.; Steinchen, W.; Hochberg, G. K. A.; Erb, T. J.: Layered entrenchment maintains essentiality in protein-protein interactions. bioRxiv: the preprint server for biology (2024)
Journal Article
Schmidt, F. V.; Schulz, L.; Zarzycki, J.; Prinz, S.; Oehlmann, N. N.; Erb, T. J.; Rebelein, J. G.: Structural insights into the iron nitrogenase complex. Nature Structural & Molecular Biology 31 (1), pp. 150 - 158 (2024)
Journal Article
Nattermann, M.; Wenk, S.; Pfister, P.; He, H.; Lee, S.H.; Szymanski, W.; Guntermann, N.; Zhu, F.; Nickel, L.; Wallner, C. et al.; Zarzycki, J.; Paczia, N.; Gaißert, N.; Franciò, G.; Leitner, W.; Gonzalez, R.; Erb, T. J.: Engineering a new-to-nature cascade for phosphate-dependent formate to formaldehyde conversion in vitro and in vivo. Nature Communications 14 (1), 2682 (2023)
Journal Article
Marchal, D. G.; Schulz, L.; Schuster, I.; Ivanovska, J.; Paczia, N.; Prinz, S.; Zarzycki, J.; Erb, T. J.: Machine learning-supported enzyme engineering toward improved CO2-fixation of Glycolyl-CoA carboxylase. ACS Synthetic Biology 12 (12), pp. 3521 - 3530 (2023)
Journal Article
Kremer, K.; Meier, D.; Theis, L.; Miller, S.; Rost-Nasshan, A.; Naing, Y. T.; Zarzycki, J.; Paczia, N.; Serrania, J.; Blumenkamp, P. et al.; Goesmann, A.; Becker, A.; Thanbichler, M.; Hochberg, G. K. A.; Carter, M. S.; Erb, T. J.: Functional degeneracy in Paracoccus denitrificans Pd1222 is coordinated via RamB, which links expression of the Glyoxylate cycle to activity of the Ethylmalonyl-CoA pathway. Applied and Environmental Microbiology 89 (7), e0023823 (2023)
Journal Article
McLean, R.; Schwander, T.; Diehl, C.; Cortina, N. S.; Paczia, N.; Zarzycki, J.; Erb, T. J.: Exploring alternative pathways for the in vitro establishment of the HOPAC cycle for synthetic CO2 fixation. Science Advances 9 (24), eadh4299 (2023)
Journal Article
Pfister, P.; Zarzycki, J.; Erb, T. J.: Structural basis for a cork-up mechanism of the intra-molecular Mesaconyl-CoA transferase. Biochemistry 62 (1), pp. 75 - 84 (2023)
Journal Article
Schulz, L.; Guo, Z.; Zarzycki, J.; Steinchen, W.; Schuller, J. M.; Heimerl, T.; Prinz, S.; Mueller-Cajar, O.; Erb, T. J.; Hochberg, G. K. A.: Evolution of increased complexity and specificity at the dawn of form I Rubiscos. Science 378 (6616), pp. 155 - 160 (2022)
Journal Article
Nattermann, M.; Burgener, S.; Pfister, P.; Chou, A.; Schulz, L.; Lee, S. H.; Paczia, N.; Zarzycki, J.; Gonzalez, R.; Erb, T. J.: Engineering a highly efficient carboligase for synthetic one-carbon metabolism. ACS Catalysis 11 (9), pp. 5396 - 5404 (2021)
Journal Article
Scheffen, M.; Marchal, D. G.; Beneyton, T.; Schuller, S.K.; Klose, M.; Diehl, C.; Lehmann, J.; Pfister, P.; Carillo, M.; He, H. et al.; Aslan, S.; Cortina, N. S.; Claus, P.; Bollschweiler, D.; Baret, J.-C.; Schuller, J.M.; Zarzycki, J.; Bar-Even, A.; Erb, T. J.: A new-to-nature carboxylation module to improve natural and synthetic CO2 fixation. Nature Catalysis 4, pp. 105 - 115 (2021)
Journal Article
Richter, A. A.; Kobus, S.; Czech, L.; Hoeppner, A.; Zarzycki, J.; Erb, T. J.; Lauterbach, L.; Dickschat, J. S.; Bremer, E.; Smits, S. H. J.: The architecture of the diaminobutyrate acetyltransferase active site provides mechanistic insight into the biosynthesis of the chemical chaperone ectoine. JOURNAL OF BIOLOGICAL CHEMISTRY 295 (9), pp. 2822 - 2838 (2020)
Journal Article
Schada v. Borzyskowsi, L.; Severi, F.; Krueger, K.; Hermann, L.; Gilardet, A.; Sippel, F.; Pommerenke, B.; Claus, P.; Cortina, N. S.; Glatter, T. et al.; Zauner, S.; Zarzycki, J.; Fuchs, B. M.; Bremer, E.; Maier, U. G.; Amann I, R.; Erb, T. J.: Marine Proteobacteria metabolize glycolate via the β-hydroxyaspartate cycle. NATURE 575 (7783), pp. 500 - + (2019)
Journal Article
Moog, D.; Schmitt, J.; Senger, J.; Zarzycki, J.; Rexer, K.-H.; Linne, U.; Erb, T. J.; Maier, U. G.: Using a marine microalga as a chassis for polyethylene terephthalate (PET) degradation. MICROBIAL CELL FACTORIES 18 (1), 171 (2019)
Journal Article
Stoffel, G. M. M.; Saez, D. A.; DeMirci, H.; Voegeli, B.; Rao, Y.; Zarzycki, J.; Yoshikuni, Y.; Wakatsuki, S.; Vohringer-Martinez, E.; Erb, T. J.: Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 116 (28), pp. 13964 - 13969 (2019)
Journal Article
Richer, A. A.; Kobus, S.; Czech, L.; Höppner, A.; Zarzycki, J.; Erb, T. J.; Lauterbach, L.; Dickschat, J. S.; Bremer, E.; Smits, S. H. J.: Making the stress-protectant ectoine: Structural and biochemical insights into the acetyltransferase EctA. Studia Universitatis Babes-Bolyai, Biologia 648 (1), p. 110 - 110 (2019)
Journal Article
Trudeau, D.; Edlich-Muth, C.; Zarzycki, J.; Scheffen, M.; Goldsmith, M.; Khersonsky, O.; Avizemer, Z.; Fleishman, S.; Cotton, C.; Erb, T. J. et al.; Tawfik, D.; Bar-Even, A.: Design and in vitro realization of carbon-conserving photorespiration. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 115 (49), pp. E11455 - E11464 (2018)
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Berhardsgrütter, I.; Vögeli, B.; Wagner, T.; Peter, D.; Cortina, N. S.; Kahnt, J.; Bange, G.; Engilberge, S.; Girard, E.; Riobe, F. et al.; Maury, O.; Shima, S.; Zarzycki, J.; Erb, T. J.: The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite. NATURE CHEMICAL BIOLOGY 14 (12), p. 1127 (2018)
Journal Article
Kerfeld, C.; Aussignargues, C.; Zarzycki, J.; Cai, F.; Sutter, M.: Bacterial microcompartments. NATURE REVIEWS MICROBIOLOGY 16 (5), pp. 277 - 290 (2018)
Journal Article
Schwander, T.; McLean, R.; Zarzycki, J.; Erb, T. J.: Structural basis for substrate specificity of methylsuccinyl-CoA dehydrogenase, an unusual member of the acyl-CoA dehydrogenase family. JOURNAL OF BIOLOGICAL CHEMISTRY 293 (5), pp. 1702 - 1712 (2018)
Journal Article
Erb, T. J.; Zarzycki, J.: A short history of RubisCO: the rise and fall (?) of Nature's predominant CO2 fixing enzyme. CURRENT OPINION IN BIOTECHNOLOGY 49, pp. 100 - 107 (2018)
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