Publications of Seigo Shima

Engilberge, S.; Wagner, T.; Santoni, G.; Breyton, C.; Shima, S.; Franzetti, B.; Riobe, F.; Maury, O.; Girard, E.: Protein crystal structure determination with the crystallophore, a nucleating and phasing agent. JOURNAL OF APPLIED CRYSTALLOGRAPHY 52, pp. 722 - 731 (2019)

Huang, G.; Wagner, T.; Wodrich, M. D.; Ataka, K.; Bill, E.; Ermler, U.; Hu, X.; Shima, S.: The atomic-resolution crystal structure of activated [Fe]-hydrogenase. Nature Catalysis 2 (6), pp. 537 - 543 (2019)

Ilina, Y.; Lorent, C.; Katz, S.; Jeoung, J.-H.; Shima, S.; Horch, M.; Zebger, I.; Dobbek, H.: X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 58 (51), pp. 18710 - 18714 (2019)

Pan, H.-J.; Huang, G.; Wodrich, M. D.; Tirani, F. F.; Ataka, K.; Shima, S.; Hu, X.: A catalytically active [Mn]-hydrogenase incorporating a non-native metal cofactor. NATURE CHEMISTRY 11 (7), pp. 669 - 675 (2019)

Voegeli, B.; Shima, S.; Erb, T. J.; Wagner, T.: Crystal structure of archaeal HMG-CoA reductase: insights into structural changes of the C-terminal helix of the class-I enzyme. FEBS LETTERS 593 (5), pp. 543 - 553 (2019)

Berhardsgrütter, I.; Vögeli, B.; Wagner, T.; Peter, D.; Cortina, N. S.; Kahnt, J.; Bange, G.; Engilberge, S.; Girard, E.; Riobe, F. et al.; Maury, O.; Shima, S.; Zarzycki, J.; Erb, T. J.: The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite. NATURE CHEMICAL BIOLOGY 14 (12), p. 1127 (2018)

Wagner, T.; Huang, G.; Ermler, U.; Shima, S.: How [Fe]-Hydrogenase from Methanothermobacter is Protected Against Light and Oxidative Stress. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 57 (46), pp. 15056 - 15059 (2018)

Vögeli, B.; Rosenthal, R.; Stoffel, G.; Wagner, T.; Kiefer, P.; Cortina, N. S.; Shima, S.; Erb, T. J.: InhA, the enoyl-thioester reductase from Mycobacterium tuberculosis forms a covalent adduct during catalysis. JOURNAL OF BIOLOGICAL CHEMISTRY 293 (44), pp. 17200 - 17207 (2018)

Engilberge, S.; Riobe, F.; Wagner, T.; Di Pietro, S.; Breyton, C.; Franzetti, B.; Shima, S.; Girard, E.; Dumont, E.; Maury, O.: Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography. CHEMISTRY-A EUROPEAN JOURNAL 24 (39), pp. 9739 - 9746 (2018)

Huang, G.; Wagner, T.; Ermler, U.; Bill, E.; Ataka, K.; Shima, S.: Dioxygen Sensitivity of [Fe]-Hydrogenase in the Presence of Reducing Substrates. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 57 (18), pp. 4917 - 4920 (2018)

Vögeli, B.; Engilberge, S.; Girard, E.; Riobe, F.; Maury, O.; Erb, T. J.; Shima, S.; Wagner, T.: Archaeal acetoacetyl-CoA thiolase/HMG-CoA synthase complex channels the intermediate via a fused CoA-binding site. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 115 (13), pp. 3380 - 3385 (2018)

Bai, L.; Wagner, T.; Xu, T.; Hu, X.; Ermler, U.; Shima, S.: A Water-Bridged H-Bonding Network Contributes to the Catalysis of the SAM-Dependent C-Methyltransferase HcgC. Angewandte Chemie International Edition 56 (36), pp. 10806 - 10809 (2017)

Wagner, T.; Koch, J.; Ermler, U.; Shima, S.: Methanogenic heterodisulfide reductase (HdrABC-MvhAGD) uses two noncubane [4Fe-4S] clusters for reduction. Science 357 (6352), pp. 699 - 702 (2017)

Wagner, T.; Wegner, C.; Kahnt, J.; Ermler, U.; Shima, S.: Phylogenetic and Structural Comparisons of the Three Types of Methyl Coenzyme M Reductase from Methanococcales and Methanobacteriales. Journal of Bacteriology 199 (16), UNSP e00197-17 (2017)

Rosenthal, R.; Vogeli, B.; Wagner, T.; Shima, S.; Erb, T.: A conserved threonine prevents self-intoxication of enoyl-thioester reductases. Nature Chemical Biology 13 (7), pp. 745 - 749 (2017)

Bai, L.; Fujishiro, T.; Huang, G.; Koch, J.; Takabayashi, A.; Yokono, M.; Tanaka, A.; Xu, T.; Hu, X.; Ermler, U. et al.; Shima, S.: Towards artificial methanogenesis: biosynthesis of the [Fe]-hydrogenase cofactor and characterization of the semisynthetic hydrogenase. Faraday Discussions 198, pp. 37 - 58 (2017)

Wang, M.; Artero, V.; Hammarstrom, L.; Martinez, J.; Karlsson, J.; Gust, D.; Summers, P.; Machan, C.; Brueggeller, P.; Windle, C. et al.; Kageshima, Y.; Cogdell, R.; Tolod, K.; Kibler, A.; Apaydin, D.; Fujita, E.; Ehrmaier, J.; Shima, S.; Gibson, E.; Karadas, F.; Harriman, A.; Inoue, H.; Kudo, A.; Takayama, T.; Wasielewski, M.; Cassiola, F.; Yagi, M.; Ishida, H.; Franco, F.; Kang, S.; Nocera, D.; Li, C.; Di Fonzo, F.; Park, H.; Sun, L.; Setoyama, T.; Kang, Y.; Ishitani, O.; Shen, J.; Son, H.; Masaoka, S.: Molecular catalysts for artificial photosynthesis: general discussion. Faraday Discussions 198, pp. 353 - 395 (2017)

Wagner, T.; Ermler, U.; Shima, S.: The methanogenic CO₂ reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters. Science 354 (6308 Sp. Iss. SI), pp. 114 - 117 (2016)

Shima, S.: The Biological Methane-Forming Reaction: Mechanism Confirmed Through Spectroscopic Characterization of a Key Intermediate. Angewandte Chemie, International Edition in English 55 (44), pp. 13648 - 13649 (2016)

Upadhyay, V.; Ceh, K.; Tumulka, F.; Abele, R.; Hoffmann, J.; Langer, J.; Shima, S.; Ermler, U.: Molecular characterization of methanogenic N-5-methyl-tetrahydromethanopterin: Coenzyme M methyltransferase. Biochimica et Biophysica Acta-Biomembranes 1858 (9), pp. 2140 - 2144 (2016)