Max Planck Institute for Terrestrial Microbiology

Publications

2024

Journal Article

Pisarz, F.; Glatter, T.; Süss, D.-T. M.; Heermann, R.; Regaiolo, A.: The Type VI secretion systems of the insect pathogen Photorhabdus luminescens are involved in interbacterial competition, motility and secondary metabolism. The Microbe 3, 100067 (2024)

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Preprint

Scarinci, G.; Ariens, J.-L.; Angelidou, G.; Schmidt, S.; Glatter, T.; Paczia, N.; Sourjik, V.: Enhanced metabolic entanglement emerges during the evolution of an interkingdom microbial community. (2024)

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Journal Article

Lehr, F.-X.; Pavletić, B.; Glatter, T.; Heimerl, T.; Moeller, R.; Niederholtmeyer, H.: Enhanced assembly of bacteriophage T7 produced in cell-free reactions under simulated microgravity. npj Microgravity 10, 30 (2024)

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Journal Article

Addison, H. G.; Glatter, T.; Hochberg, G. K. A.; Rebelein, J. G.: Two distinct ferredoxins are essential for nitrogen fixation by the iron nitrogenase in Rhodobacter capsulatus. mBio 15 (3), e0331423 (2024)

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Preprint

Aydin, E.; Boehme, J.; Keil, B.; Schreiner, S.; Zunar, B.; Glatter, T.; Kilchert, C.: DEAD-box ATPase Dbp2 mediates mRNA release after 3'-end formation. (2024)

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Preprint

Su, L.; Huber, E. M.; Westphalen, M.; Gellner, J.; Bode, E.; Köbel, T.; Grün, P.; Alanjary, M. M.; Glatter, T.; Schindler, D. et al.; Groll, M.; Bode, H. B.: Identification, structure and function of the methyltransferase involved in the biosynthesis of the dithiolopyrrolone antibiotic xenorhabdin. (2024)

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Journal Article

Jakob, S.; Steinchen, W.; Hanßmann, J.; Rosum, J.; Langenfeld, K.; Osorio-Valeriano, M.; Steube, N.; Giammarinaro, P. I.; Hochberg, G. K. A.; Glatter, T. et al.; Bange, G.; Diepold, A.; Thanbichler, M.: The virulence regulator VirB from Shigella flexneri uses a CTP-dependent switch mechanism to activate gene expression. Nature Communications 15 (1), 318 (2024)

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Book Chapter

Lampaki, D.; Diepold, A.; Glatter, T.: In-depth quantitative proteomics analysis of the Pseudomonas aeruginosa secretome. In: Pseudomonas aeruginosa. Methods in Molecular Biology, Vol. 2721, pp. 197 - 211 (Ed. Bertoni, G.) (2024)

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Journal Article

Wimmi, S.; Balinovic, A.; Brianceau, C. F.; Pintor, K. L.; Vielhauer, J.; Turkowyd, B.; Helbig, C.; Fleck, M.; Langenfeld, K.; Kahnt, J. et al.; Glatter, T.; Endesfelder, U.; Diepold, A.: Cytosolic sorting platform complexes shuttle type III secretion system effectors to the injectisome in Yersinia enterocolitica. Nature Microbiology 9, pp. 185 - 199 (2024)

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2023

Journal Article

Herfurth, M.; Müller, F.; Søgaard-Andersen, L.; Glatter, T.: A miniTurbo-based proximity labeling protocol to identify conditional protein interactomes in vivo in Myxococcus xanthus. STAR Protocols 4 (4), 102657 (2023)

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Preprint

Addison, H. G.; Glatter, T.; Hochberg, G. K. A.; Rebelein, J. G.: Two distinct ferredoxins are essential for nitrogen fixation by the iron nitrogenase in Rhodobacter capsulatus. (2023)

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Book Chapter

Lampaki, D.; Diepold, A.; Glatter, T.: In-depth quantitative proteomics analysis of the Pseudomonas aeruginosa secretome. In: Pseudomonas aeruginosa: Methods and Protocols in Methods in Molecular Biology, Vol. 2721, pp. 197 - 211 (Eds. Bertoni, G.; Ferrara, S.). Humana New York, NY (2023)

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Preprint

Arroyo Perez, E. E.; Hook, J. C.; Alvarado, A.; Wimmi, S.; Glatter, T.; Thormann, K. M.; Ringgaard, S.: A conserved cell-pole determinant organizes proper polar flagellum formation. (2023)

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Preprint

Lubrano, P.; Schramm, T.; Lorenz, E.; Alvarado, A.; Eigenmann, S. C.; Stadelmann, A.; Thavapalan, S.; Waffenschmidt, N.; Glatter, T.; Peter, S. et al.; Drescher, K.; Link, H.: Purine nucleotide limitation undermines antibiotic action in clinical Escherichia coli. (2023)

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Journal Article

Nikolić, I.; Glatter, T.; Ranković, T.; Berić, T.; Stanković, S.; Diepold, A.: Repertoire and abundance of secreted virulence factors shape the pathogenic capacity of Pseudomonas syringae pv. aptata. Frontiers in Microbiology 14, 1205257 (2023)

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Journal Article

Seidel, M.; Skotnicka, D.; Glatter, T.; Søgaard-Andersen, L.: During heat stress in Myxococcus xanthus, the CdbS PilZ domain protein, in concert with two PilZ-DnaK chaperones, perturbs chromosome organization and accelerates cell death. PLOS Genetics 19 (6), e1010819 (2023)

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Journal Article

Guo, K.; Glatter, T.; Paczia, N.; Liesack, W.: Asparagine uptake: a cellular strategy of Methylocystis to combat severe salt stress. Applied and Environmental Microbiology 89 (6), e0011323 (2023)

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Preprint

Seidel, M.; Skotnicka, D.; Glatter, T.; Søgaard-Andersen, L.: During heat stress in Myxococcus xanthus, the CdbS PilZ domain protein, along with two PilZ-DnaK chaperones, perturbs chromosome organization and accelerates cell death. (2023)

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Preprint

Nikolic, I.; Glatter, T.; Rankovic, T.; Beric, T.; Stankovic, S.; Diepold, A.: Repertoire and abundance of secreted virulence factors shape the pathogenic capacity of Pseudomonas syringae pv. aptata. (2023)

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Journal Article

Schada v. Borzyskowsi, L.; Schulz-Mirbach, H.; Troncoso Castellanos, M.; Severi, F.; Gomez Coronado, P. A.; Paczia, N.; Glatter, T.; Bar-Even, A.; Lindner, S. N.; Erb, T. J.: Implementation of the β-hydroxyaspartate cycle increases growth performance of Pseudomonas putida on the PET monomer ethylene glycol. Metabolic Engineering 76, pp. 97 - 109 (2023)

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Journal Article

Izquierdo Martinez, A.; Billini, M.; Miguel-Ruano, V.; Hernández-Tamayo, R.; Richter, P.; Biboy, J.; Batuecas, M. T.; Glatter, T.; Vollmer, W.; Graumann, P. L. et al.; Hermoso, J. A.; Thanbichler, M.: DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus. Nature Communications 14 (1), 4095 (2023)

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Journal Article

Schott, S.; Scheuer, R.; Ermoli, F.; Glatter, T.; Evguenieva-Hackenberg, E.; Diepold, A.: A ParDE toxin–antitoxin system is responsible for the maintenance of the Yersinia virulence plasmid but not for type III secretion-associated growth inhibition. Frontiers in Cellular and Infection Microbiology 13, 166077 (2023)

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Journal Article

Weiland, P.; Dempwolff, F.; Steinchen, W.; Freibert, S.-A.; Tian, H.; Glatter, T.; Martin, R.; Thomma, B. P. H. J.; Bange, G.; Altegoer, F.: Structural and functional analysis of the cerato-platanin-like protein Cpl1 suggests diverging functions in smut fungi. Molecular Plant Pathology 24 (7), pp. 768 - 787 (2023)

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Journal Article

Wolfram-Schauerte, M.; Pozhydaieva, N.; Grawenhoff, J.; Welp, L. M.; Silbern, I.; Wulf, A.; Billau, F. A.; Glatter, T.; Urlaub, H.; Jäschke, A. et al.; Höfer, K.: A viral ADP-ribosyltransferase attaches RNA chains to host proteins. Nature 620 (7976), pp. 1054 - 1062 (2023)

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2022

Preprint

Lehr, F.-X.; Pavletić, B.; Glatter, T.; Heimerl, T.; Moeller, R.; Niederholtmeyer, H.: Enhanced assembly of bacteriophage T7 produced in cell-free reactions under simulated microgravity. (2022)

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Journal Article

Wolfram-Schauerte, M.; Pozhydaieva, N.; Viering, M.; Glatter, T.; Höfer, K.: Integrated omics reveal time-resolved insights into T4 phage infection of E. coli on proteome and transcriptome levels. Viruses 14 (11), 2502 (2022)

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Preprint

Dronsella, B.; Orsi, E.; Benito-Vaquerizo, S.; Glatter, T.; Bar-Even, A.; Erb, T. J.; Claassens, N. J.: Engineered synthetic one-carbon fixation exceeds yield of the Calvin Cycle. (2022)

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Journal Article

Schwabe, J.; Pérez-Burgos, M.; Herfurth, M.; Glatter, T.; Søgaard-Andersen, L.: Evidence for a widespread third system for bacterial polysaccharide export across the outer membrane comprising a composite OPX/β-barrel translocon. mBio 13 (5), e02032-22 (2022)

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Journal Article

Guo, K.; Hakobyan, A.; Glatter, T.; Paczia, N.; Liesack, W.: Methylocystis sp. strain SC2 acclimatizes to increasing NH₄⁺ levels by a precise rebalancing of enzymes and osmolyte composition. mSystems 7 (5), e0040322 (2022)

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publisher-version

Preprint

Izquierdo-Martinez, A.; Miguel-Ruano, V.; Hernández-Tamayo, R.; Biboy, J.; Batuecas, M. T.; Billini, M.; Glatter, T.; Vollmer, W.; Graumann, P. L.; Hermoso, J. A. et al.; Thanbichler, M.: DipM controls multiple autolysins and mediates two regulatory feedback loops promoting cell constriction in C. crescentus. (2022)

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Journal Article

Rick, T.; Kreiling, V.; Hoing, A.; Fiedler, S.; Glatter, T.; Steinchen, W.; Hochberg, G. K. A.; Bahre, H.; Seifert, R.; Bange, G. et al.; Knauer, S. K.; Graumann, P. L.; Thormann, K. M.: GGDEF domain as spatial on-switch for a phosphodiesterase by interaction with landmark protein HubP. npj Biofilms and Microbiomes 8, 35 (2022)

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Journal Article

Herfurth, M.; Treuner-Lange, A.; Glatter, T.; Wittmaack, N.; Hoiczyk, E.; Pierik, A. J.; Søgaard-Andersen, L.: A noncanonical cytochrome c stimulates calcium binding by PilY1 for type IVa pili formation. Proceedings of the National Academy of Sciences of the United States of America 119 (6), e2115061119 (2022)

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Journal Article

Koebel, T. S.; Palhares, R. M.; Fromm, C.; Szymanski, W. G.; Angelidou, G.; Glatter, T.; Georg, J.; Berghoff, B. A.; Schindler, D.: An easy-to-use plasmid toolset for efficient generation and benchmarking of synthetic small RNAs in bacteria. ACS Synthetic Biology 11 (9), pp. 2989 - 3003 (2022)

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Preprint

Schada v. Borzyskowsi, L.; Schulz-Mirbach, H.; Troncoso Castellanos, M.; Severi, F.; Gomez Coronado, P. A.; Glatter, T.; Bar-Even, A.; Lindner, S. N.; Erb, T. J.: Implementation of the β-hydroxyaspartate cycle increases growth performance of Pseudomonas putida on the PET monomer ethylene glycol. (2022)

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Journal Article

Schwan, M.; Khaledi, A.; Willger, S.; Papenfort, K.; Glatter, T.; Häussler, S.; Thormann, K. M.: FlrA-independent production of flagellar proteins is required for proper flagellation in Shewanella putrefaciens. Molecular Microbiology 118 (6), pp. 670 - 682 (2022)

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Preprint

Schwan, M.; Khaledi, A.; Willger, S.; Papenfort, K.; Glatter, T.; Häußler, S.; Thormann, K. M.: Constitutive production of flagellar proteins is required for proper flagellation in Shewanella putrefaciens. (2022)

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Preprint

Weiland, P.; Dempwolff, F.; Steinchen, W.; Freibert, S.-A.; Glatter, T.; Martin, R.; Bange, G.; Altegoer, F.: Structural and functional analysis of the cerato-platanin-like effector protein Cpl1 suggests diverging functions in smut fungi. (2022)

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Preprint

Wimmi, S.; Fleck, M.; Helbig, C.; Brianceau, C. F.; Langenfeld, K.; Szymanski, W. G.; Angelidou, G.; Glatter, T.; Diepold, A.: Pilotins are mobile T3SS components involved in assembly and substrate specificity of the bacterial type III secretion system. (2022)

MPG.PuRe

2021

Journal Article

Wang, C.-Y.; Lempp, M.; Farke, N.; Donati, S.; Glatter, T.; Link, H.: Metabolome and proteome analyses reveal transcriptional misregulation in glycolysis of engineered E. coli. Nature Communications 12 (1), 4929 (2021)

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Preprint

Herfurth, M.; Treuner-Lange, A.; Glatter, T.; Wittmaack, N.; Hoiczyk, E.; Pierik, A. J.; Søgaard-Andersen, L.: A repurposed, non-canonical cytochrome c, chaperones calcium binding by PilY1 for type IVa pili formation. (2021)

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Preprint

Singh, P. K.; Rode, D. K.H.; Buffard, P.; Nosho, K.; Bayer, M.; Jeckel, H.; Jelli, E.; Neuhaus, K.; Jiménez-Siebert, E.; Peschek, N. et al.; Glatter, T.; Papenfort, K.; Drescher, K.: Vibrio cholerae biofilm dispersal regulator causes cell release from matrix through type IV pilus retraction. (2021)

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Journal Article

Donati, S.; Kuntz, M.; Pahl, V.; Farke, N.; Beuter, D.; Glatter, T.; Gomes-Filho, J. V.; Randau, L.; Wang, C.-Y.; Link, H.: Multi-omics analysis of CRISPRi-knockdowns identifies mechanisms that buffer decreases of enzymes in E. coli metabolism. Cell Systems 12 (1), pp. 56 - 67.E6 (2021)

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Journal Article

Fukada, F.; Roessel, N.; Muench, K.; Glatter, T.; Kahmann, R.: A small Ustilago maydis effector acts as a novel adhesin for hyphal aggregation in plant tumors. New Phytologist 231 (1), pp. 416 - 431 (2021)

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Journal Article

Ludwig, N.; Reissmann, S.; Schipper, K.; Gonzalez, C.; Assmann, D.; Glatter, T.; Moretti, M.; Ma, L.-S.; Rexer, K.-H.; Snetselaar, K. et al.; Kahmann, R.: A cell surface-exposed protein complex with an essential virulence function in Ustilago maydis. Nature Microbiology 6, pp. 722 - 730 (2021)

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2020

Journal Article

Neubacher, N.; Tobias, N. J.; Huber, M.; Cai, X.; Glatter, T.; Pidot, S. J.; Stinear, T. P.; Lutticke, A. L.; Papenfort, K.; Bode, H. B.: Symbiosis, virulence and natural-product biosynthesis in entomopathogenic bacteria are regulated by a small RNA. Nat Microbiol 5 (12), pp. 1481 - 1489 (2020)

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Journal Article

Teteneva, N. A.; Mart'yanov V, S.; Esteban Lopéz, M.; Kahnt, J.; Glatter, T.; Netrusov I, A.; Plakunov, V. K.; Sourjik, V.: Multiple Drug-Induced Stress Responses Inhibit Formation of Escherichia coli Biofilms. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 86 (21), e01113-20 (2020)

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Journal Article

Treuner-Lange, A.; Chang, Y.-W.; Glatter, T.; Herfurth, M.; Lindow, S.; Chreifi, G.; Jensen, G. J.; Sogaard-Andersen, L.: PilY1 and minor pilins form a complex priming the type IVa pilus in Myxococcus xanthus. NATURE COMMUNICATIONS 11 (1), 5054 (2020)

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Journal Article

Freitas, C.; Glatter, T.; Ringgaard, S.: Specific proteomic adaptation to distinct environments in Vibrio parahaemolyticus includes significant fluctuations in expression of essential proteins. ENVIRONMENTAL MICROBIOLOGY 22 (10), pp. 4279 - 4294 (2020)

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Journal Article

Kreienbaum, M.; Doerrich, A. K.; Brandt, D.; Schmid, N. E.; Leonhard, T.; Hager, F.; Brenzinger, S.; Hahn, J.; Glatter, T.; Ruwe, M. et al.; Briegel, A.; Kalinowski, J.; Thormann, K. M.: Isolation and Characterization ofShewanellaPhage Thanatos Infecting and LysingShewanella oneidensisand Promoting Nascent Biofilm Formation. FRONTIERS IN MICROBIOLOGY 11, 573260 (2020)

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Journal Article

Hakobyan, A.; Zhu, J.; Glatter, T.; Paczia, N.; Liesack, W.: Hydrogen utilization by Methylocystis sp. strain SC2 expands the known metabolic versatility of type IIa methanotrophs. METABOLIC ENGINEERING 61, pp. 181 - 196 (2020)

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Journal Article

Anders, A.; Ghosh, B.; Glatter, T.; Sourjik, V.: Design of a MAPK signalling cascade balances energetic cost versus accuracy of information transmission. NATURE COMMUNICATIONS 11 (1), 3494 (2020)

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Journal Article

Schramm, T.; Lempp, M.; Beuter, D.; Sierra González, S.; Glatter, T.; Link, H.: High-throughput enrichment of temperature-sensitive argininosuccinate synthetase for two-stage citrulline production in E. coli. METABOLIC ENGINEERING 60, pp. 14 - 24 (2020)

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Journal Article

Iyer, S. C.; Casas-Pastor, D.; Kraus, D.; Mann, P.; Schirner, K.; Glatter, T.; Fritz, G.; Ringgaard, S.: Transcriptional regulation by sigma factor phosphorylation in bacteria. NATURE MICROBIOLOGY 5 (3), pp. 395 - + (2020)

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Journal Article

Freitas, C.; Glatter, T.; Ringgaard, S.: The release of a distinct cell type from swarm colonies facilitates dissemination of Vibrio parahaemolyticus in the environment. ISME JOURNAL 14 (1), pp. 230 - 244 (2020)

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Journal Article

Lampaki, D.; Diepold, A.; Glatter, T.: A Serial Sample Processing Strategy with Improved Performance for in-Depth Quantitative Analysis of Type III Secretion Events in Pseudomonas aeruginosa. JOURNAL OF PROTEOME RESEARCH 19 (1), pp. 543 - 553 (2020)

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2019

Journal Article

Schada v. Borzyskowsi, L.; Severi, F.; Krueger, K.; Hermann, L.; Gilardet, A.; Sippel, F.; Pommerenke, B.; Claus, P.; Cortina, N. S.; Glatter, T. et al.; Zauner, S.; Zarzycki, J.; Fuchs, B. M.; Bremer, E.; Maier, U. G.; Amann I, R.; Erb, T. J.: Marine Proteobacteria metabolize glycolate via the β-hydroxyaspartate cycle. NATURE 575 (7783), pp. 500 - + (2019)

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Journal Article

Hakobyan, A.; Schneider, M. B.; Liesack, W.; Glatter, T.: Efficient Tandem LysC/Trypsin Digestion in Detergent Conditions. PROTEOMICS 19 (20), 1900136 (2019)

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Journal Article

Sander, T.; Wang, C.-Y.; Glatter, T.; Link, H.: CRISPRi-Based Downregulation of Transcriptional Feedback Improves Growth and Metabolism of Arginine Overproducing E. coli. ACS SYNTHETIC BIOLOGY 8 (9), pp. 1983 - 1990 (2019)

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Journal Article

Brenzinger, S.; van der Aart, L. T.; van Wezel, G. P.; Lacroix, J.-M.; Glatter, T.; Briegel, A.: Structural and Proteomic Changes in Viable but Non-culturable Vibrio cholerae. FRONTIERS IN MICROBIOLOGY 10, 793 (2019)

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Journal Article

Gomez-Santos, N.; Glatter, T.; Koebnik, R.; Swiatek-Polatynska, M. A.; Sogaard-Andersen, L.: A TonB-dependent transporter is required for secretion of protease PopC across the bacterial outer membrane. NATURE COMMUNICATIONS 10, 1360 (2019)

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Journal Article

Liccardi, G.; Garcia, L. R.; Tenev, T.; Annibaldi, A.; Legrand, A. J.; Robertson, D.; Feltham, R.; Anderton, H.; Darding, M.; Peltzer, N. et al.; Dannappel, M.; Schunke, H.; Fava, L. L.; Haschka, M. D.; Glatter, T.; Nesvizhskii, A.; Schmidt, A.; Harris, P. A.; Bertin, J.; Gough, P. J.; Villunger, A.; Silke, J.; Pasparakis, M.; Bianchi, K.; Meier, P.: RIPK1 and Caspase-8 Ensure Chromosome Stability Independently of Their Role in Cell Death and Inflammation. MOLECULAR CELL 73 (3), pp. 413 - + (2019)

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Journal Article

Han, X.; Altegoer, F.; Steinchen, W.; Binnebesel, L.; Schuhmacher, J.; Glatter, T.; Giammarinaro, P. I.; Djamei, A.; Rensing, S. A.; Reissmann, S. et al.; Kahmann, R.; Bange, G.: A kiwellin disarms the metabolic activity of a secreted fungal virulence factor. NATURE 565 (7741), pp. 650 - + (2019)

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Journal Article

Rudenko, J.; Ni, B.; Glatter, T.; Sourjik, V.: Inefficient Secretion of Anti-sigma Factor FlgM Inhibits Bacterial Motility at High Temperature. ISCIENCE 16, pp. 145 - + (2019)

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Journal Article

Sander, T.; Farke, N.; Diehl, C.; Kuntz, M.; Glatter, T.; Link, H.: Allosteric Feedback Inhibition Enables Robust Amino Acid Biosynthesis in E-coli by Enforcing Enzyme Overabundance. CELL SYSTEMS 8 (1), pp. 66 - + (2019)

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Journal Article

Zingler, P.; Saerchen, V.; Glatter, T.; Caning, L.; Saggau, C.; Kathayat, R. S.; Dickinson, B. C.; Adam, D.; Schneider-Brachert, W.; Schuetze, S. et al.; Fritsch, J.: Palmitoylation is required for TNF-R1 signaling. CELL COMMUNICATION AND SIGNALING 17 (1), 90 (2019)

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2018

Journal Article

Feltham, R.; Jamal, K.; Tenev, T.; Liccardi, G.; Jaco, I.; Domingues, C. M.; Morris, O.; John, S. W.; Annibaldi, A.; Widya, M. et al.; Kearney, C. J.; Clancy, D.; Elliott, P. R.; Glatter, T.; Qiao, Q.; Thompson, A. J.; Nesvizhskii, A.; Schmidt, A.; Komander, D.; Wu, H.; Martin, S.; Meier, P.: Mind Bomb Regulates Cell Death during TNF Signaling by Suppressing RIPK1's Cytotoxic Potential. CELL REPORTS 23 (2), pp. 470 - 484 (2018)

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Journal Article

Muraleedharan, S.; Freitas, C.; Mann, P.; Glatter, T.; Ringgaard, S.: A cell length-dependent transition in MinD-dynamics promotes a switch in division-site placement and preservation of proliferating elongated Vibrio parahaemolyticus swarmer cells. MOLECULAR MICROBIOLOGY 109 (3), pp. 365 - 384 (2018)

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Journal Article

Schada v. Borzyskowsi, L.; Carillo, M.; Leupold, S.; Glatter, T.; Kiefer, P.; Weishaupt, R.; Heinemann, M.; Erb, T. J.: An engineered Calvin-Benson-Bassham cycle for carbon dioxide fixation in Methylobacterium extorquens AM1. METABOLIC ENGINEERING 47, pp. 423 - 433 (2018)

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Journal Article

Yang, W.; Alvarado Rodriguez, A. G.; Glatter, T.; Ringgaard, S.; Briegel, A.: Baseplate variability of Vibrio cholerae chemoreceptor arrays. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 115 (52), pp. 13365 - 13370 (2018)

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2017

Journal Article

Yuan, J.; Jin, F.; Glatter, T.; Sourjik, V.: Osmosensing by the bacterial PhoQ/PhoP two-component system. Proceedings of the National Academy of Sciences of the United States of America 114 (50), pp. E10792 - E10798 (2017)

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Book Chapter

Laventie, B.-J.; Glatter, T.; Jenal, U.: Pull-Down with a c-di-GMP-Specific Capture Compound Coupled to Mass Spectrometry as a Powerful Tool to Identify Novel Effector Proteins. In: C-DI-GMP SIGNALING: Methods and Protocols, pp. 361 - 376 (2017)

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2016

Journal Article

Ahrne, E.; Glatter, T.; Vigano, C.; von Schubert, C.; Nigg, E. A.; Schmidt, A.: Evaluation and Improvement of Quantification Accuracy in Isobaric Mass Tag-Based Protein Quantification Experiments. JOURNAL OF PROTEOME RESEARCH 15 (8), pp. 2537 - 2547 (2016)

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Journal Article

Balmer, M. L.; Ma, E. H.; Bantug, G. R.; Grahlert, J.; Pfister, S.; Glatter, T.; Jauch, A.; Dimeloe, S.; Slack, E.; Dehio, P. et al.; Krzyzaniak, M. A.; King, C. G.; Burgener, A.-V.; Fischer, M.; Develioglu, L.; Belle, R.; Recher, M.; Bonilla, W. V.; Macpherson, A. J.; Hapfelmeier, S.; Jones, R. G.; Hess, C.: Memory CD8(+) T Cells Require Increased Concentrations of Acetate Induced by Stress for Optimal Function. IMMUNITY 44 (6), pp. 1312 - 1324 (2016)

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Journal Article

Glatter, T.; Ahrne, E.; Schmidt, A.: Comparison of Different Sample Preparation Protocols Reveals Lysis Buffer-Specific Extraction Biases in Gram-Negative Bacteria and Human Cells (vol 14, pg 4472, 2015). JOURNAL OF PROTEOME RESEARCH 15 (2), p. 679 - 679 (2016)

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Journal Article

Gliesche, D. G.; Hussner, J.; Witzigmann, D.; Porta, F.; Glatter, T.; Schmidt, A.; Huwyler, J.; zu Schwabedissen, H. E. M.: Secreted Matrix Metalloproteinase-9 of Proliferating Smooth Muscle Cells as a Trigger for Drug Release from Stent Surface Polymers in Coronary Arteries. MOLECULAR PHARMACEUTICS 13 (7), pp. 2290 - 2300 (2016)

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Journal Article

Hauri, S.; Comoglio, F.; Seimiya, M.; Gerstung, M.; Glatter, T.; Hansen, K.; Aebersold, R.; Paro, R.; Gstaiger, M.; Beisel, C.: A High-Density Map for Navigating the Human Polycomb Complexome. CELL REPORTS 17 (2), pp. 583 - 595 (2016)

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Journal Article

Koerver, L.; Melzer, J.; Roca, E. A.; Teichert, D.; Glatter, T.; Arama, E.; Broemer, M.: The de-ubiquitylating enzyme DUBA is essential for spermatogenesis in Drosophila. CELL DEATH AND DIFFERENTIATION 23 (12), pp. 2019 - 2030 (2016)

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Journal Article

Rotem, O.; Nesper, J.; Borovok, I.; Gorovits, R.; Kolot, M.; Pasternak, Z.; Shin, I.; Glatter, T.; Pietrokovski, S.; Jenal, U. et al.; Jurkevitch, E.: An Extended Cyclic Di-GMP Network in the Predatory Bacterium Bdellovibrio bacteriovorus. JOURNAL OF BACTERIOLOGY 198 (1), pp. 127 - 137 (2016)

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2015

Journal Article

Bauer, M.; Ahrné, E.; Baron, A. P.; Glatter, T.; Fava, L. L.; Santamaria, A.; Nigg, E. A.; Schmidt, A.: Assessment of current mass spectrometric workflows for the quantification of low abundant proteins and phosphorylation sites. Data in Brief 5, pp. 297 - 304 (2015)

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Journal Article

Cajanek, L.; Glatter, T.; Nigg, E. A.: The E3 ubiquitin ligase Mib1 regulates Plk4 and centriole biogenesis. JOURNAL OF CELL SCIENCE 128 (9), pp. 1674 - 1682 (2015)

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Journal Article

Glatter, T.; Ahrne, E.; Schmidt, A.: Comparison of Different Sample Preparation Protocols Reveals Lysis Buffer-Specific Extraction Biases in Gram-Negative Bacteria and Human Cells. JOURNAL OF PROTEOME RESEARCH 14 (11), pp. 4472 - 4485 (2015)

MPG.PuRe

Journal Article

Harms, A.; Stanger, F. V.; Scheu, P. D.; de Jong, I. G.; Goepfert, A.; Glatter, T.; Gerdes, K.; Schirmer, T.; Dehio, C.: Adenylylation of Gyrase and Topo IV by FicT Toxins Disrupts Bacterial DNA Topology. CELL REPORTS 12 (9), pp. 1497 - 1507 (2015)

MPG.PuRe

Journal Article

Laventie, B.-J.; Nesper, J.; Ahrne, E.; Glatter, T.; Schmidt, A.; Jenal, U.: Capture Compound Mass Spectrometry - A Powerful Tool to Identify Novel c-di-GMP Effector Proteins. JOVE-JOURNAL OF VISUALIZED EXPERIMENTS (97), e51404 (2015)

MPG.PuRe

2014

Journal Article

Bauer, M.; Ahrne, E.; Baron, A. P.; Glatter, T.; Fava, L. L.; Santamaria, A.; Nigg, E. A.; Schmidt, A.: Evaluation of Data-Dependent and -Independent Mass Spectrometric Workflows for Sensitive Quantification of Proteins and Phosphorylation Sites. JOURNAL OF PROTEOME RESEARCH 13 (12), pp. 5973 - 5988 (2014)

MPG.PuRe

Journal Article

Maze, A.; Glatter, T.; Bumann, D.: The Central Metabolism Regulator EIIA(Glc) Switches Salmonella from Growth Arrest to Acute Virulence through Activation of Virulence Factor Secretion. CELL REPORTS 7 (5), pp. 1426 - 1433 (2014)

MPG.PuRe

Journal Article

Pieles, K.; Glatter, T.; Harms, A.; Schmidt, A.; Dehio, C.: An experimental strategy for the identification of AMPylation targets from complex protein samples. PROTEOMICS 14 (9), pp. 1048 - 1052 (2014)

MPG.PuRe

2013

Journal Article

Ahrne, E.; Molzahn, L.; Glatter, T.; Schmidt, A.: Critical assessment of proteome-wide label-free absolute abundance estimation strategies. PROTEOMICS 13 (17), pp. 2567 - 2578 (2013)

MPG.PuRe

Journal Article

Berti, M.; Chaudhuri, A. R.; Thangavel, S.; Gomathinayagam, S.; Kenig, S.; Vujanovic, M.; Odreman, F.; Glatter, T.; Graziano, S.; Mendoza-Maldonado, R. et al.; Marino, F.; Lucic, B.; Biasin, V.; Gstaiger, M.; Aebersold, R.; Sidorova, J. M.; Monnat Jr., R. J.; Lopes, M.; Vindigni, A.: Human RECQ1 promotes restart of replication forks reversed by DNA topoisomerase I inhibition. NATURE STRUCTURAL & MOLECULAR BIOLOGY 20 (3), pp. 347 - 354 (2013)

MPG.PuRe

2012

Journal Article

Choi, H.; Glatter, T.; Gstaiger, M.; Nesyizhskii, A. I.: SAINT-MS1: Protein-Protein Interaction Scoring Using Label-free Intensity Data in Affinity Purification-Mass Spectrometry Experiments. JOURNAL OF PROTEOME RESEARCH 11 (4), pp. 2619 - 2624 (2012)

MPG.PuRe

Journal Article

Glatter, T.; Ludwig, C.; Ahrne, E.; Aebersold, R.; Heck, A. J. R.; Schmidt, A.: Large-Scale Quantitative Assessment of Different In-Solution Protein Digestion Protocols Reveals Superior Cleavage Efficiency of Tandem Lys-C/Trypsin Proteolysis over Trypsin Digestion. JOURNAL OF PROTEOME RESEARCH 11 (11), pp. 5145 - 5156 (2012)

MPG.PuRe

Journal Article

Nesper, J.; Reinders, A.; Glatter, T.; Schmidt, A.; Jenal, U.: A novel capture compound for the identification and analysis of cyclic di-GMP binding proteins. JOURNAL OF PROTEOMICS 75 (15), pp. 4874 - 4878 (2012)

MPG.PuRe

2011

Journal Article

Glatter, T.; Schittenhelm, R. B.; Rinner, O.; Roguska, K.; Wepf, A.; Juenger, M. A.; Koehler, K.; Jevtov, I.; Choi, H.; Schmidt, A. et al.; Nesvizhskii, A. I.; Stocker, H.; Hafen, E.; Aebersold, R.; Gstaiger, M.: Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome. MOLECULAR SYSTEMS BIOLOGY 7, 547 (2011)

MPG.PuRe

Journal Article

Iijima, T.; Wu, K.; Witte, H.; Hanno-Iijima, Y.; Glatter, T.; Richard, S.; Scheiffele, P.: SAM68 Regulates Neuronal Activity-Dependent Alternative Splicing of Neurexin-1. CELL 147 (7), pp. 1601 - 1614 (2011)

MPG.PuRe

Journal Article

Ritz, D.; Vuk, M.; Kirchner, P.; Bug, M.; Schuetz, S.; Hayer, A.; Bremer, S.; Lusk, C.; Baloh, R. H.; Lee, H. et al.; Glatter, T.; Gstaiger, M.; Aebersold, R.; Weihl, C. C.; Meyer, H.: Endolysosomal sorting of ubiquitylated caveolin-1 is regulated by VCP and UBXD1 and impaired by VCP disease mutations. NATURE CELL BIOLOGY 13 (9), pp. 1116 - U148 (2011)

MPG.PuRe

2009

Journal Article

Glatter, T.; Wepf, A.; Aebersold, R.; Gstaiger, M.: An integrated workflow for charting the human interaction proteome: insights into the PP2A system. MOLECULAR SYSTEMS BIOLOGY 5, 237 (2009)

MPG.PuRe

Journal Article

Habjan, M.; Pichlmair, A.; Elliott, R. M.; Oeverby, A. K.; Glatter, T.; Gstaiger, M.; Superti-Furga, G.; Unger, H.; Weber, F.: NSs Protein of Rift Valley Fever Virus Induces the Specific Degradation of the Double-Stranded RNA-Dependent Protein Kinase. JOURNAL OF VIROLOGY 83 (9), pp. 4365 - 4375 (2009)

MPG.PuRe

Journal Article

Theis, M.; Slabicki, M.; Junqueira, M.; Paszkowski-Rogacz, M.; Sontheimer, J.; Kittler, R.; Heninger, A.-K.; Glatter, T.; Kruusmaa, K.; Poser, I. et al.; Hyman, A. A.; Pisabarro, M. T.; Gstaiger, M.; Aebersold, R.; Shevchenko, A.; Buchholz, F.: Comparative profiling identifies C13orf3 as a component of the Ska complex required for mammalian cell division. EMBO JOURNAL 28 (10), pp. 1453 - 1465 (2009)

MPG.PuRe

Journal Article

Wepf, A.; Glatter, T.; Schmidt, A.; Aebersold, R.; Gstaiger, M.: Quantitative interaction proteomics using mass spectrometry. NATURE METHODS 6 (3), pp. 203 - 205 (2009)

MPG.PuRe