Publications of Seigo Shima

Aziz, Iram, Kayastha, Kanwal, Kaltwasser, Susann, Vonck, Janet, Welsch, Sonja, Murphy, Bonnie J., Kahnt, Jörg, Wu, Di, Wagner, Tristan, Shima, Seigo and Ermler, Ulrich: (2024) Structural and mechanistic basis of the central energy-converting methyltransferase complex of methanogenesis, Proceedings of the National Academy of Sciences of the United States of America, Washington, D.C., National Academy of Sciences, 121 (14).

Nomura, Shunsuke, Paczia, Nicole, Kahnt, Jörg and Shima, Seigo: (2024) Isolation of an H₂-dependent electron-bifurcating CO₂-reducing megacomplex with MvhB polyferredoxin from Methanothermobacter marburgensis, The FEBS Journal, Wiley-Blackwell, March.

Schaupp, Sebastian, Arriaza-Gallardo, Francisco J., Paczia, Nicole, Ataka, Kenichi and Shima, Seigo: (2024) Acyl and CO ligands in the [Fe]-hydrogenase cofactor scramble upon photolysis, Angewandte Chemie International Edition, Weinheim, Wiley-VCH, 63 (6).

Gehl, Manuel, Demmer, Ulrike, Ermler, Ulrich and Shima, Seigo: (2023) Crystal structure of FAD-independent methylene-tetrahydrofolate reductase from Mycobacterium hassiacum, Proteins: Structure, Function, and Bioinformatics, New York, NY, John Wiley & Sons, 91, April, pp. 1329–1340.

Sakai, Yasuyoshi, Yurimoto, Hiroya and Shima, Seigo: (2023) Methane monooxygenases; physiology, biochemistry and structure, Catalysis Science & Technology, Cambridge, Royal Society of Chemistry, 13 (22), pp. 6342–6354.

Arriaza-Gallardo, F. J., Schaupp, S., Zheng, Y.-C., Abdul-Halim, M. F., Hui-Jie, P., Kahnt, J., Angelidou, G., Paczia, N., Hu, X., Costa, K. and Shima, S.: (2022) The function of two radical-SAM enzymes, HcgA and HcgG, in the biosynthesis of the [Fe]-hydrogenase cofactor, Angewandte Chemie, International Edition in English, Weinheim, Wiley-VCH, 61 (50).

Schaupp, S., Arriaza Gallardo, F. J., Pan, H. J., Kahnt, J., Angelidou, G., Paczia, N., Costa, K., Hu, X. and Shima, S.: (2022) In vitro biosynthesis of the [Fe]-hydrogenase cofactor verifies the proposed biosynthetic precursors, Angewandte Chemie, International Edition in English, Weinheim, Wiley-VCH, 61 (22).

Watanabe, T. and Shima, S.: (2022) A enzyme complex of methanogenic electron-bifurcating and CO₂-fixing enzymes, Bioscience & Industry, Tokyo, Tokyo Baioindasutori Kyokai, 80 (2), pp. 122–123.

Roux, Amandine, Talon, Romain, Alsalman, Zaynab, Engilberge, Sylvain, D’Aléo, Anthony, Di Pietro, Sebastiano, Robin, Adeline, Bartocci, Alessio, Pilet, Guillaume, Dumont, Elise, Wagner, Tristan, Shima, Seigo, Riobé, François, Girard, Eric and Maury, Olivier: (2021) Influence of divalent cations in the protein crystallization process assisted by lanthanide-based additives, Inorganic Chemistry, Washington, DC, American Chemical Society, 60 (20), pp. 15208–15214.

Pan, Hui-Jie, Huang, Gangfeng, Wodrich, Matthew D., Tirani, Farzaneh Fadaei, Ataka, Kenichi, Shima, Seigo and Hu, Xile: (2021) Diversifying metal-ligand cooperative catalysis in semi-synthetic [Mn]-hydrogenases, Angewandte Chemie International Edition, Weinheim, Wiley-VCH, 60 (24), pp. 13350–13357.

Watanabe, Tomohiro, Pfeil-Gardiner, Olivia, Kahnt, Jörg, Koch, J., Shima, Seigo and Murphy, Bonnie J.: (2021) Three-megadalton complex of methanogenic electron-bifurcating and CO₂-fixing enzymes, Science, Washington, D.C., American Association for the Advancement of Science, 373 (6559), pp. 1151–1155.

Watanabe, Tomohiro and Shima, Seigo: (2021) MvhB-type polyferredoxin as an electron-transfer chain in putative redox-enzyme complexes, Chemistry Letters, Tokyo, Chemical Society of Japan, 50 (2), pp. 353–360.

Shima, Seigo, Huang, Gangfeng, Wagner, Tristan and Ermler, Ulrich: (2020) Structural Basis of Hydrogenotrophic Methanogenesis, (Annual Review of Microbiology, 74), 74, September, pp. 713–733 .

Engilberge, Sylvain, Wagner, Tristan, Carpentier, Philippe, Girard, Eric and Shima, Seigo: (2020) Krypton-derivatization highlights O₂-channeling in a four-electron reducing oxidase, Chemical Communications, Cambridge, UK, Royal Society of Chemistry, 56, August, pp. 10863–10866.

Huang, Gangfeng, Wagner, Tristan, Demmer, Ulrike, Warkentin, Eberhard, Ermler, Ulrich and Shima, Seigo: (2020) The Hydride Transfer Process in NADP-dependent Methylene-tetrahydromethanopterin Dehydrogenase, Journal of Molecular Biology (London), London, Academic Press, 432 (7), pp. 2042–2054.

Huang, Gangfeng, Wagner, Tristan, Ermler, Ulrich and Shima, Seigo: (2020) Methanogenesis involves direct hydride transfer from H₂ to an organic substrate, Nature Reviews Chemistry, London, Nature Publishing Group, 4 (2), pp. 213–221.

Engilberge, Sylvain, Wagner, Tristan, Carpentier, Philippe, Girard, Eric and Shima, Seigo: (2020) Krypton-derivatization highlights O-2-channeling in a four-electron reducing oxidase, CHEMICAL COMMUNICATIONS, 56 (74), pp. 10863–10866.

Huang, Gangfeng, Arriaza Gallardo, Francisco Javier, Wagner, Tristan and Shima, Seigo: (2020) Crystal structures of [Fe]-hydrogenase from Methanolacinia paynteri suggest a path of the FeGP-cofactor incorporation process, Inorganics, Basel, Switzerland, MDPI, 8 (9).

Hemmann, Jethro L., Wagner, Tristan, Shima, Seigo and Vorholt, Julia A.: (2019) Methylofuran is a prosthetic group of the formyltransferase/hydrolase complex and shuttles one-carbon units between two active sites, Proceedings of the National Academy of Sciences of the United States of America, Washington, D.C., National Academy of Sciences, 116 (51), pp. 25583–25590.

Watanabe, Tomohiro, Wagner, Tristan, Huang, Gangfeng, Kahnt, Jörg, Ataka, Kenichi, Ermler, Ulrich and Shima, Seigo: (2019) The Bacterial [Fe]‐Hydrogenase Paralog HmdII Uses Tetrahydrofolate Derivatives as Substrates, Angewandte Chemie International Edition in English, Weinheim, Wiley-VCH, 58 (11), pp. 3506–3510.