Publications

2024
Journal Article
Wimmi, S.; Fleck, M.; Helbig, C.; Brianceau, C. F.; Langenfeld, K.; Szymanski, W. G.; Angelidou, G.; Glatter, T.; Diepold, A.: Pilotins are mobile T3SS components involved in assembly and substrate specificity of the bacterial type III secretion system. Molecular Microbiology 121, pp. 304 - 323 (2024)
Book Chapter
Diepold, A.: Defining assembly pathways by fluorescence microscopy. In: Bacterial Secretion Systems in Methods in Molecular Biology, Vol. 2715, pp. 383 - 394 (Eds. Journet, L.; Cascales, E.). Humana, New York, NY (2024)
Journal Article
Jakob, S.; Steinchen, W.; Hanßmann, J.; Rosum, J.; Langenfeld, K.; Osorio-Valeriano, M.; Steube, N.; Giammarinaro, P. I.; Hochberg, G. K. A.; Glatter, T. et al.; Bange, G.; Diepold, A.; Thanbichler, M.: The virulence regulator VirB from Shigella flexneri uses a CTP-dependent switch mechanism to activate gene expression. Nature Communications 15 (1), 318 (2024)
Book Chapter
Lampaki, D.; Diepold, A.; Glatter, T.: In-depth quantitative proteomics analysis of the Pseudomonas aeruginosa secretome. In: Pseudomonas aeruginosa. Methods in Molecular Biology, Vol. 2721, pp. 197 - 211 (Ed. Bertoni, G.) (2024)
Journal Article
Wimmi, S.; Balinovic, A.; Brianceau, C. F.; Pintor, K. L.; Vielhauer, J.; Turkowyd, B.; Helbig, C.; Fleck, M.; Langenfeld, K.; Kahnt, J. et al.; Glatter, T.; Endesfelder, U.; Diepold, A.: Cytosolic sorting platform complexes shuttle type III secretion system effectors to the injectisome in Yersinia enterocolitica. Nature Microbiology 9, pp. 185 - 199 (2024)
2023
Journal Article
Nikolić, I.; Glatter, T.; Ranković, T.; Berić, T.; Stanković, S.; Diepold, A.: Repertoire and abundance of secreted virulence factors shape the pathogenic capacity of Pseudomonas syringae pv. aptata. Frontiers in Microbiology 14, 1205257 (2023)
Preprint
Nikolic, I.; Glatter, T.; Rankovic, T.; Beric, T.; Stankovic, S.; Diepold, A.: Repertoire and abundance of secreted virulence factors shape the pathogenic capacity of Pseudomonas syringae pv. aptata. (2023)
Journal Article
Carsten, A.; Rudolph, M.; Weihs, T.; Schmidt, R.; Jansen, I.; Wurm, C. A.; Diepold, A.; Failla, A. V.; Wolters, M.; Aepfelbacher, M.: MINFLUX imaging of a bacterial molecular machine at nanometer resolution. Methods and Applications in Fluorescence 11, 015004 (2023)
Journal Article
Schott, S.; Scheuer, R.; Ermoli, F.; Glatter, T.; Evguenieva-Hackenberg, E.; Diepold, A.: A ParDE toxin–antitoxin system is responsible for the maintenance of the Yersinia virulence plasmid but not for type III secretion-associated growth inhibition. Frontiers in Cellular and Infection Microbiology 13, 166077 (2023)
2022
Journal Article
Prindle, J. R.; Wang, Y.; Rocha, J. M.; Diepold, A.; Gahlmann, A.: Distinct cytosolic complexes containing the type III secretion system ATPase resolved by three-dimensional single-molecule tracking in live Yersinia enterocolitica. Microbiology Spectrum 10 (6), e0174422 (2022)
Journal Article
Unni, R.; Pintor, K. L.; Diepold, A.; Unterweger, D.: Presence and absence of type VI secretion systems in bacteria. Microbiology 168 (4), 001151 (2022)
Journal Article
Gurung, J. M.; Amer, A. A. A.; Chen, S.; Diepold, A.; Francis, M. S.: Type III secretion by Yersinia pseudotuberculosis is reliant upon an authentic N-terminal YscX secretor domain. Molecular Microbiology 117, pp. 886 - 906 (2022)
Journal Article
Lindner, F.; Diepold, A.: Optogenetics in bacteria - applications and opportunities. FEMS Microbiology Reviews 46 (2), fuab055 (2022)
Preprint
Prindle, J. R.; Wang, Y.; Rocha, J.; Diepold, A.; Gahlmann, A.: Distinct cytosolic complexes containing the type III secretion system ATPase resolved by 3D single-molecule tracking in live Yersinia enterocolitica. (2022)
Preprint
Wimmi, S.; Fleck, M.; Helbig, C.; Brianceau, C. F.; Langenfeld, K.; Szymanski, W. G.; Angelidou, G.; Glatter, T.; Diepold, A.: Pilotins are mobile T3SS components involved in assembly and substrate specificity of the bacterial type III secretion system. (2022)
2021
Journal Article
Wimmi, S.; Balinovic, A.; Jeckel, H.; Selinger, L.; Lampaki, D.; Eisemann, E.; Meuskens, I.; Linke, D.; Drescher, K.; Endesfelder, U. et al.; Diepold, A.: Dynamic relocalization of cytosolic type III secretion system components prevents premature protein secretion at low external pH. Nature Communications 12 (1), 1625 (2021)
Journal Article
Berger, C.; Ravelli, R. B. G.; Lopez-Iglesias, C.; Kudryashev, M.; Diepold, A.; Peters, P. J.: Structure of the Yersinia injectisome in intracellular host cell phagosomes revealed by cryo FIB electron tomography. Journal of Structural Biology 213 (1), 107701 (2021)
Journal Article
Milne-Davies, B.; Wimmi, S.; Diepold, A.: Adaptivity and dynamics in type III secretion systems. Molecular Microbiology 115 (3), pp. 395 - 411 (2021)
Journal Article
Wimmi, S.; Balinovic, A.; Jeckel, H.; Selinger, L.; Lampaki, D.; Eisemann, E.; Meuskens, I.; Linke, D.; Drescher, K.; Endesfelder, U. et al.; Diepold, A.: Author Correction: Dynamic relocalization of cytosolic type III secretion system components prevents premature protein secretion at low external pH. Nature Communications 12 (1), p. 2685 - 2685 (2021)
2020
Journal Article
Lindner, F.; Milne-Davies, B.; Langenfeld, K.; Stiewe, T.; Diepold, A.: LITESEC-T3SS-Light-controlled protein delivery into eukaryotic cells with high spatial and temporal resolution. NATURE COMMUNICATIONS 11 (1), 2381 (2020)
Book Chapter
Diepold, A.: Assembly and Post-assembly Turnover and Dynamics in the Type III Secretion System. In: BACTERIAL TYPE III PROTEIN SECRETION SYSTEMS, pp. 35 - 66 (Eds. Wagner, S.; Galan, J. E.). Cham Springer International Publishing (2020)
Journal Article
Lampaki, D.; Diepold, A.; Glatter, T.: A Serial Sample Processing Strategy with Improved Performance for in-Depth Quantitative Analysis of Type III Secretion Events in Pseudomonas aeruginosa. JOURNAL OF PROTEOME RESEARCH 19 (1), pp. 543 - 553 (2020)
Book Chapter
Wagner, S.; Diepold, A.: A Unified Nomenclature for Injectisome-Type Type III Secretion Systems. In: BACTERIAL TYPE III PROTEIN SECRETION SYSTEMS, Vol. 427, pp. 1 - 10 (Ed. Wagner, S.). Cham Springer (2020)
2019
Journal Article
Tseytin, I.; Mitrovic, B.; David, N.; Langenfeld, K.; Zarivach, R.; Diepold, A.; Sal-Man, N.: The Role of the Small Export Apparatus Protein, SctS, in the Activity of the Type III Secretion System. FRONTIERS IN MICROBIOLOGY 10, 2551 (2019)
Journal Article
Baker, A. E.; Webster, S. S.; Diepold, A.; Kuchma, S. L.; Bordeleau, E.; Armitage, J. P.; O´Tool, G. A.: Flagellar stators stimulate c-di-GMP production by Pseudomonas aeruginosa. Journal of Bacteriology 201 (18), e00741-18 (2019)
Journal Article
Milne-Davies, B.; Helbig, C.; Wimmi, S.; Cheng, D. W. C.; Paczia, N.; Diepold, A.: Life After Secretion-Yersinia enterocolitica Rapidly Toggles Effector Secretion and Can Resume Cell Division in Response to Changing External Conditions. FRONTIERS IN MICROBIOLOGY 10, 2128 (2019)
2018
Journal Article
Nauth, T.; Huschka, F.; Schweizer, M.; Bosse, J.; Diepold, A.; Failla, A.; Steffen, A.; Stradal, T.; Wolters, M.; Aepfelbacher, M.: Visualization of translocons in Yersinia type III protein secretion machines during host cell infection. PLOS PATHOGENS 14 (12), e1007527 (2018)
Journal Article
Rocha, J.; Richardson, C.; Zhang, M.; Darch, C.; Cai, E.; Diepold, A.; Gahlmann, A.: Single-molecule tracking in live Yersinia enterocolitica reveals distinct cytosolic complexes of injectisome subunits. INTEGRATIVE BIOLOGY 10 (9) (2018)
Journal Article
Rocha, J.; Richardson, C.; Zhang, M.; Diepold, A.; Gahlmann, A.: Cytosolic Assembly Among Bacterial Type 3 Secretion System Proteins Revealed by High-Throughput Single-Molecule Tracking. BIOPHYSICAL JOURNAL 114 (3 Suppl. 1), p. 534A - 534A (2018)
2017
Journal Article
Diepold, A.; Sezgin, E.; Huseyin, M.; Mortimer, T.; Eggeling, C.; Armitage, J.: A dynamic and adaptive network of cytosolic interactions governs protein export by the T3SS injectisome. Nature Communications 8, 15940 (2017)
Journal Article
Morgan, J. M.; Duncan, M. C.; Johnson, K. S.; Diepold, A.; Lam, H.; Dupzyk, A. J.; Martin, L. R.; Wong, W. R.; Armitage, J. P.; Linington, R. G. et al.; Auerbuch, V.: Piericidin A1 Blocks Yersinia Ysc Type III Secretion System Needle Assembly. MSPHERE 2 (1), e00030-17 (2017)
Book Chapter
Zoued, A.; Diepold, A.: Defining Assembly Pathways by Fluorescence Microscopy. In: Bacterial Protein Secretion Systems. Methods in Molecular Biology, pp. 289 - 298. Humana Press, New York, NY, New York (2017)
2016
Journal Article
Baker, A. E.; Diepold, A.; Kuchma, S. L.; Scott, J. E.; Ha, D. G.; Orazi, G.; Armitage, J. P.; O'Toole, G. A.: PilZ Domain Protein FlgZ Mediates Cyclic Di-GMP-Dependent Swarming Motility Control in Pseudomonas aeruginosa. JOURNAL OF BACTERIOLOGY 198 (13), pp. 1837 - 1846 (2016)
2015
Journal Article
Diepold, A.; Armitage, J. P.: Type III secretion systems: the bacterial flagellum and the injectisome. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES 370 (1679), 20150020 (2015)
Journal Article
Diepold, A.; Kudryashev, M.; Delalez, N. J.; Berry, R. M.; Armitage, J. P.: Composition, Formation, and Regulation of the Cytosolic C-ring, a Dynamic Component of the Type III Secretion Injectisome. PLOS BIOLOGY 13 (1), e1002039 (2015)
Journal Article
Gerc, A. J.; Diepold, A.; Trunk, K.; Porter, M.; Rickman, C.; Armitage, J. P.; Stanley-Wall, N. R.; Coulthurst, S. J.: Visualization of the Serratia Type VI Secretion System Reveals Unprovoked Attacks and Dynamic Assembly. CELL REPORTS 12 (12), pp. 2131 - 2142 (2015)
Journal Article
Kudryashev, M.; Diepold, A.; Amstutz, M.; Armitage, J. P.; Stahlberg, H.; Cornelis, G. R.: Yersinia enterocolitica type III secretion injectisomes form regularly spaced clusters, which incorporate new machines upon activation. MOLECULAR MICROBIOLOGY 95 (5), pp. 875 - 884 (2015)
2014
Journal Article
Diepold, A.; Wagner, S.: Assembly of the bacterial type III secretion machinery. FEMS MICROBIOLOGY REVIEWS 38 (4), pp. 802 - 822 (2014)
2013
Journal Article
Kudryashev, M.; Stenta, M.; Schmelz, S.; Amstutz, M.; Wiesand, U.; Castano-Diez, D.; Degiacomi, M. T.; Muennich, S.; Bleck, C. K. E.; Kowal, J. et al.; Diepold, A.; Heinz, D. W.; Dal Peraro, M.; Cornelis, G. R.; Stahlberg, H.: In situ structural analysis of the Yersinia enterocolitica injectisome. ELIFE 2, e00792 (2013)
2012
Journal Article
Diepold, A.; Wiesand, U.; Amstutz, M.; Cornelis, G. R.: Assembly of the Yersinia injectisome: the missing pieces. MOLECULAR MICROBIOLOGY 85 (5), pp. 878 - 892 (2012)
2011
Journal Article
Diepold, A.; Wiesand, U.; Cornelis, G. R.: The assembly of the export apparatus (YscR,S,T,U,V) of the Yersinia type III secretion apparatus occurs independently of other structural components and involves the formation of an YscV oligomer. MOLECULAR MICROBIOLOGY 82 (2), pp. 502 - 514 (2011)
2010
Journal Article
Diepold, A.; Amstutz, M.; Abel, S.; Sorg, I.; Jenal, U.; Cornelis, G. R.: Deciphering the assembly of the Yersinia type III secretion injectisome. EMBO JOURNAL 29 (11), pp. 1928 - 1940 (2010)
2007
Journal Article
Diepold, A.; Li, G.; Lennarz, W. J.; Nuernberger, T.; Brunner, F.: The Arabidopsis AtPNG1 gene encodes a peptide: N-glycanase. PLANT JOURNAL 52 (1), pp. 94 - 104 (2007)
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